10.1371/journal.pone.0168161.g004 Cunling Jia Cunling Jia Xiaoyan Kong Xiaoyan Kong James E. Koltes James E. Koltes Xiao Gou Xiao Gou Shuli Yang Shuli Yang Dawei Yan Dawei Yan Shaoxiong Lu Shaoxiong Lu Zehui Wei Zehui Wei Co-expression networks based on the PCIT method. Public Library of Science 2016 IKBKG PIF RIF gene Co-Expression Network Analysis Unraveling Transcriptional Regulation adaptive features Duroc pigs EFEMP 1 HOXB 6 High-Altitude Adaptation hypoxia-adaptive genes 3B DEG ATF 6 ontology terms whole-transcriptome microarrays RBPJ altitude hypoxic environment Tibetan Pig novel regulators impact factor analysis PI 3K SF lung tissues KLF 6 hypoxia-adaptive phenotypes KEGG pathway hypoxia adaption co-expression regulation networks 2016-12-09 20:23:17 Figure https://plos.figshare.com/articles/figure/Co-expression_networks_based_on_the_PCIT_method_/4306949 <p>(A) Tibetan group at high altitude (660 nodes and 1878 edges) (B) Duroc group at high altitude (512 nodes and 1641 edges). Node shape and color were mapped to the different gene types: transcription regulators (triangles, yellow), differential expression genes and differential PIF genes (circles, black).</p>