TY - DATA T1 - Transcriptome - Parvularia atlantis (Nuclearia sp. ATCC 50694) PY - 2017/09/26 AU - Multicellgenome Lab AU - Guifré Torruella UR - https://figshare.com/articles/dataset/Nuclearia_sp_ATCC_50694_-_Transcriptome/3898485 DO - 10.6084/m9.figshare.3898485.v4 L4 - https://ndownloader.figshare.com/files/7676641 L4 - https://ndownloader.figshare.com/files/7676644 KW - Nuclearia sp. ATCC 50694 KW - transcriptome KW - Evolutionary Biology KW - Microbiology N2 - Reads are deposited in NCBI: https://www.ncbi.nlm.nih.gov/sra/?term=SRS725006- Assembly in-home BGI to obtain Unigene (contigs)- ORF prediction using TransDecoder (Trinity plugin) and PfamScan to obtain coding sequences (CDS files) from transcripts (mRNA)- Protein translations are included (pep)- clean.fasta: Assembly cleaned from cross-contamination of other species multiplexed (Corallochytrium limacisporum Hawaii, Pirum gemmata and Abeoforma whisleri) after applying CroCo V0.1.1 (Simion et al. in prep). It may contain bacterial contamination.Guifré Torruella, Alex de Mendoza, Xavier Grau-Bové, Meritxell Antó, Mark A. Chaplin, Javier del Campo, Laura Eme, Gregorio Pérez-Cordón, Christopher M. Whipps, Krista M. Nichols, Richard Paley, Andrew J. Roger, Ariadna Sitjà-Bobadilla, Stuart Donachie, and Iñaki Ruiz-Trillo. (2015) Phylogenomics reveals convergent evolution of lifestyles in close relatives of animals and fungi. Current Biology 25(18):2404-10.www.multicellgenome.com ER -