Declaring a tuberculosis outbreak over with genomic epidemiology
Hollie-Ann Hatherell
Xavier Didelot
Sue L. Pollock
Patrick Tang
Anamaria Crisan
James C. Johnston
Caroline Colijn
Jennifer Gardy
10.6084/m9.figshare.3153280.v1
https://microbiology.figshare.com/articles/dataset/Declaring_a_tuberculosis_outbreak_over_with_genomic_epidemiology/3153280
Text file commands used in reference alignment and
variant calling and fasta file of the final dataset of variants as published in<i> Microbial Genomics </i>in the following article: 'Declaring a tuberculosis outbreak over with genomic epidemiology'
2016-04-12 16:18:44
tuberculosis
transmission
genomic epidemiology
Phylogenetics
Microbiology