10.6084/m9.figshare.2067249.v2
Andrew Page
Andrew
Page
vanessa wong
vanessa
wong
KATHRYN HOLT
KATHRYN
HOLT
A multi FASTA alignment of Salmonella Typhi genomes, mapped to CT18 from the Nature genetics paper - Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events
figshare
2016
Salmonella Typhi
H58
SNP-sites
CT18
MDR
multi-FASTA
Bioinformatics
2016-01-26 10:12:09
Dataset
https://figshare.com/articles/dataset/s_typhi_wong_holt_aln_gz/2067249
A multi FASTA alignment of Salmonella Typhi genomes, mapped to CT18 ( AL513382) with repeat regions and mobile elements filtered out. It is an intermediate result from the Nature Genetics paper "Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events" by Vanessa Wong. This dataset is used as part of another paper on the SNP-sites software.