RMSD vs. simulation time of the catalytic loop (loop-4) in each model.
Nan Wang
Jiahong Jiang
Xichen Li
Hongwei Tan
Jimin Zheng
Guangju Chen
Zongchao Jia
10.1371/journal.pone.0134879.g010
https://plos.figshare.com/articles/figure/_RMSD_vs_simulation_time_of_the_catalytic_loop_loop_4_in_each_model_/1506106
<p>Loop-4-1 and loop-4-2 represent two loop-4s in the model because of two YhdE molecules. RMSD vs. time of loop-4 in the apo-YhdE monomer of open/closed state is shown for comparison.</p>
2015-08-07 03:53:52
Free Energy Calculations
YhdE dimerization
allosteric communication network
Molecular Dynamics Simulation Studies
cell metabolism pathway
dTTP binding sites
YhdE Dimerization YhdE
dTTP binding