10.1371/journal.pone.0124215.g003 Matthias Wissuwa Matthias Wissuwa Katsuhiko Kondo Katsuhiko Kondo Takuya Fukuda Takuya Fukuda Asako Mori Asako Mori Michael T. Rose Michael T. Rose Juan Pariasca-Tanaka Juan Pariasca-Tanaka Tobias Kretzschmar Tobias Kretzschmar Stephan M. Haefele Stephan M. Haefele Terry J. Rose Terry J. Rose Haplotype analysis for main loci associated with PUE on chromosomes 1 (A), 4 (B), 11 (C), and 12 (D). Public Library of Science 2015 expression patterns Internal Phosphorus Utilization Efficiency Unmasking Novel Loci chromosome 11. chromosome 1 haplotype Rice Germplasm expression analysis P uptake coding regions GWAS priority candidate genes plant P uptake genotypic variation rice gene pool fertilizer price increases Internal P utilization efficiency rice varieties plant growth PUE hydroponic system chromosome 1 2015-04-29 04:28:58 Figure https://plos.figshare.com/articles/figure/_Haplotype_analysis_for_main_loci_associated_with_PUE_on_chromosomes_1_A_4_B_11_C_and_12_D_/1398734 <p>Within haplotypes most significant SNPs highlighted in bold print and average PUE values of accessions belonging to respective haplotype are given. SNP alleles improving PUE are highlighted in green while negative alleles are highlighted grey. Linkage blocks for the respective subpopulation are indicated in blue above the haplotypes (see <a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0124215#pone.0124215.s005" target="_blank">S5 Fig</a> for details on LD analysis).</p>