10.1371/journal.pgen.1004915.g003 Irina Makarevitch Irina Makarevitch Amanda J. Waters Amanda J. Waters Patrick T. West Patrick T. West Michelle Stitzer Michelle Stitzer Candice N. Hirsch Candice N. Hirsch Jeffrey Ross-Ibarra Jeffrey Ross-Ibarra Nathan M. Springer Nathan M. Springer Stress-induced up-regulation of gene expression correlates with the variation in TE presence. Public Library of Science 2015 Abiotic Stress Transposable elements TE families gene expression response stress conditions gene expression dna Many genes exhibit abiotic stress TE transcript levels 2015-01-08 03:30:25 Figure https://plos.figshare.com/articles/figure/_Stress_induced_up_regulation_of_gene_expression_correlates_with_the_variation_in_TE_presence_/1286605 <p>(A) Proportion of genes up-regulated in B73 that are also up-regulated in Mo17 and Oh43 is shown for all TE families under the stress condition with highest enrichment for the TE family. (B) The relative expression levels in stress compared to control treatments (log<sub>2</sub> ratio) is shown for B73, Mo17, and Oh43 for each of the 10 expressed genes that are polymorphic for insertions of TEs. The presence/absence of the TE for each genotype-inbred combination is shown by ‘+’ and ‘-‘ symbols. The genes are as follows: 1-GRMZM2G102447; 2-GRMZM2G108057; 3-GRMZM2G071206; 4-GRMZM2G108149; 5-GRMZM2G400718; 6-GRMZM2G347899; 7-GRMZM2G517127; 8-GRMZM2G378770; 9-GRMZM2G177923; 10- GRMZM2G504524. All genes with TE insertion polymorphism are listed in <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1004915#pgen.1004915.s013" target="_blank">S8 Table</a>.</p>