%0 Generic %A Vanni, Chiara %D 2020 %T Agnostos-wf test dataset %U https://figshare.com/articles/dataset/Agnostos-wf_test_dataset/12630581 %R 10.6084/m9.figshare.12630581.v3 %2 https://ndownloader.figshare.com/files/23854697 %2 https://ndownloader.figshare.com/files/23854703 %2 https://ndownloader.figshare.com/files/23854706 %K test dataset %K TARA samples %K contigs %K Bioinformatics %K Computational Biology %K Microbiology %X
Test dataset for the agnostos-wf (https://github.com/functional-dark-side/agnostos-wf).

The dataset consists of 3 TARA Ocean surface samples from the Indian Ocean (IO), all within a size fraction of 0.1-0.22 micro-m (giant viruses, archaea and bacteria enriched fraction).

Two samples are used to test the DB-creation module:
TARA_041_SRF_0.1-0.22 (90,135 contigs)
TARA_039_SRF_0.1-0.22 (118,883 contigs)

And one sample is used to test the DB-update module:
TARA_038_SRF_0.1-0.22 (157,925 contigs)

Contextual data for the chosen samples can be found in the file: TARA_IO_samples_contextual_data.tsv.gz
%I figshare