10.1371/journal.pone.0101271.g004
Qingpeng Zhang
Qingpeng
Zhang
Jason Pell
Jason
Pell
Rosangela Canino-Koning
Rosangela
Canino-Koning
Adina Chuang Howe
Adina
Chuang Howe
C. Titus Brown
C. Titus
Brown
Time for several k-mer counting tools to retrieve the counts of 9.7 m randomly chosen k-mers (y axis), plotted against the number of distinct k-mers in the data set being queried (x axis).
Public Library of Science
2014
Computational biology
genome analysis
Genomic databases
genetics
genomics
molecular biology
Molecular biology techniques
Sequencing techniques
Genome sequencing
Sequence analysis
Computing methods
cloud computing
software engineering
Software tools
k-mer
counting
tools
retrieve
counts
randomly
chosen
k-mers
plotted
queried
2014-07-25 03:13:45
Figure
https://plos.figshare.com/articles/figure/_Time_for_several_k_mer_counting_tools_to_retrieve_the_counts_of_9_7_m_randomly_chosen_k_mers_y_axis_plotted_against_the_number_of_distinct_k_mers_in_the_data_set_being_queried_x_axis_/1118673
<p>BFCounter, DSK, Turtle, KAnalyze, and KMC do not support this functionality.</p>