AMPHORA software for automated phylogenomic analysis

Name: AMPHORA software for automated phylogenomic analysis
Published: 2013-06-14T00:59:23+00:00
License: https://creativecommons.org/licenses/by/4.0/
Keywords: genomics, evolution, Metagenomics, phylogenomics, microbes, microbiology, Microbiology, Bioinformatics, Genetics, Molecular Biology, Ecology, Evolutionary Biology

dataset

posted on 2013-06-14, 00:59 authored by Jonathan EisenJonathan Eisen

AMPHORA is an Automated Phylogenomic Inference Pipeline for bacterial sequences. From a given a set of protein sequences, it automatically identifies 31 phylogenetic marker genes. It then generates high-quality multiple sequence alignments for these genes and make tree-based phylotype assignments.

AMPHORA software for automated phylogenomic analysis

History

Usage metrics

Categories

Keywords

Licence

Exports